Download processed single-cell and spatial transcriptomics data from oral potentially malignant disorder samples
Oral Potentially Malignant Disorders
5,527
3 samples
58 Subtypes
This dataset contains single-cell RNA sequencing data from oral potentially malignant disorder (OPMD) tissue samples, providing insights into the cellular composition and molecular characteristics of pre-malignant oral lesions.
Complete single-cell RNA sequencing data in standard 10X Genomics format
File: OPMD_10x_raw_package.zip
Format: ZIP
Description: Contains barcodes/features/matrix/metadata in standard 10X format
File: OPMD_barcodes.tsv.gz
Format: TSV.GZ
Description: Contains cell barcode information for each cell in the dataset.
File: OPMD_features.tsv.gz
Format: TSV.GZ
Description: Gene features and annotations including gene symbols and IDs.
File: OPMD_matrix.mtx.gz
Format: MTX.GZ
Description: Sparse expression matrix containing gene expression counts.
File: OPMD_metadata.csv.gz
Format: CSV.GZ
Description: Cell-level metadata including annotations and sample information.
Markers of OPMD are published in Zenodo：scHNDB-Tissue Type-Marker Genes（DOI 10.5281/zenodo.19535702）。File name:OPMD_All_Markers_of_each_subpopulation.xls、OPMD_Top10_Markers_of_each_subpopulation.xls。