PBMC Tissue
Download processed single-cell RNA sequencing data from peripheral blood mononuclear cell samples
Dataset Information
Tissue Type
PBMC
Total Cells
483,106
Sample Count
92 samples
Subpopulation Count
68 Subtypes
This dataset contains single-cell RNA sequencing data from peripheral blood mononuclear cells (PBMCs), providing comprehensive insights into immune cell composition and function in blood samples.
Raw Data Files
Raw Data Files
Complete single-cell RNA sequencing data in standard 10X Genomics format
10X Raw Data Package
File: PBMC_10x_raw_package.zip
Format: ZIP
Description: Contains barcodes/features/matrix/metadata in standard 10X format
Download
Barcode File
File: PBMC_barcodes.tsv.gz
Format: TSV.GZ
Description: Contains cell barcode information for each cell in the dataset.
Feature File
File: PBMC_features.tsv.gz
Format: TSV.GZ
Description: Gene features and annotations including gene symbols and IDs.
Matrix File
File: PBMC_matrix.mtx.gz
Format: MTX.GZ
Description: Sparse expression matrix containing gene expression counts.
Metadata File
File: PBMC_metadata.csv.gz
Format: CSV.GZ
Description: Cell-level metadata including annotations and sample information.
Marker Genes
Markers of PBMC are published in Zenodo：scHNDB-Tissue Type-Marker Genes（DOI 10.5281/zenodo.19535702）File name: PBMC_All_Markers_of_each_subpopulation.xls、PBMC_Top10_Markers_of_each_subpopulation.xls。